Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRWKQGWTRGSLFAALNIAAVVAVLMLGAGVAVAD-----PDA--APGDPGGPGAPGAQR----DPSTRRQLTCWRRHPTRWRCRRHLTRWRRRHLTRSRRPRLTRWQCR
3AW9 Chain:A ((210-286))
LAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWR----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6956 for 281 contacts (24.8/contact) +
2D Compatibility (PS) -6990 + (NN) -2957 + (LL) 2760
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -3781.0 ( -13.46 by residue)
QMean score : -0.004
(partial model without unconserved sides chains):
PDB file :
Tito_3AW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AW9-query.scw
PDB file :
Tito_Scwrl_3AW9.pdb
: