Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRAWQAGCETSVLLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI
4IF4 Chain:A ((69-207))
---------------------------------------------------------------IKKDLPQ--IKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKD-IADAVRKTSRGESVFEPEVLVKMRNRMKKRA------ELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLI
General information:
TITO was launched using:
RESULT:
Template:
4IF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91490 for 885 contacts (-103.4/contact) +
2D Compatibility (PS) -15209 + (NN) -9239 + (LL) 5852
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -122736.0 ( -138.68 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_4IF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IF4-query.scw
PDB file :
Tito_Scwrl_4IF4.pdb
: