Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGITVASVDYRLAPENPYPAALGDCYSALTWL---ASLPAVDPARVAIGGASAGGGLAAALALLARDRGGITPA-FQLLVYPMLDDRPSIAPANPHYR---LWNGRANRFGWRAYL-GDADARVAVPGRRDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
| 3QH4 Chain:A ((69-311)) | --------------------------------------------------------VPVRIYRAAPT--PAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAAD-GSLPPVIFQLLHQPVLDDRPTASRSE--FRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159644 for 2115 contacts (-75.5/contact) +
2D Compatibility (PS) -25701 + (NN) -17471 + (LL) 4368
1D Compatibility (HY) -18800 + (ID) 5400
Total energy: -222648.0 ( -105.27 by residue)
QMean score : 0.445
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