Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAGGDHPR
3PZY Chain:A ((7-160))
--TRSARVIIASTRASS----DRCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIRRSGLPKVPTSVLSRGVCGVAGQTLIVNLPGSPGGVRDGLGVLAGVLDHALDQLAGK----
General information:
TITO was launched using:
RESULT:
Template:
3PZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112552 for 1274 contacts (-88.3/contact) +
2D Compatibility (PS) -16179 + (NN) -5592 + (LL) 272
1D Compatibility (HY) -17600 + (ID) 5750
Total energy: -157401.0 ( -123.55 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_3PZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PZY-query.scw
PDB file :
Tito_Scwrl_3PZY.pdb
: