Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDEPTPPEATTPNSESDPRYDSAGVPTFESVRE-----KIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE
2J3M Chain:B ((377-428))
---QPISYEDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSDAMGATVLD-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3968 for 156 contacts (25.4/contact) +
2D Compatibility (PS) -4958 + (NN) -4262 + (LL) 3008
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -4844.0 ( -31.05 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2J3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J3M-query.scw
PDB file :
Tito_Scwrl_2J3M.pdb
: