Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRALIIVDVQNDFCEGGSLAVTGGAALARAISDYLAEAADYHH-VVATKDFHIDPGDHFSGTPDYSSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKGAYTGAYSGFEGVDENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELVCSS
1ILW Chain:A ((5-178))
--ALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWH--PENHISFR-ERGGPWPRHCVQNTPGAEFVVDLPEDAVIISKATEPDKEAYSGFEGTD-----LAKILRGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIV---
General information:
TITO was launched using:
RESULT:
Template:
1ILW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113742 for 1446 contacts (-78.7/contact) +
2D Compatibility (PS) -19385 + (NN) -11170 + (LL) 60
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -161237.0 ( -111.51 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1ILW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ILW-query.scw
PDB file :
Tito_Scwrl_1ILW.pdb
: