Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTWPLPDRLSINSLSGTPAVDLSSFTDFLRRQAPELLPASISGGAPLAGGDAQLPHGTTIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTATGIAGTAAVAVEFARLYAVELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSAGRIVSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADDDSATGGPDLVRGIFPTAVIIDADGAVDVPESRIAELARAIIESRSGADTFGSDGGEK
2FHG Chain:H ((301-522))
---------------------------------------------------------TTIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTATGIAGTAAVAVEFARLYAVELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSAGRIVSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADDDSATGGPDLVRGIFPTAVIIDADGAVDVPESRIAELARAIIESRS------------
General information:
TITO was launched using:
RESULT:
Template:
2FHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109455 for 1925 contacts (-56.9/contact) +
2D Compatibility (PS) -24810 + (NN) -18591 + (LL) 1556
1D Compatibility (HY) -28800 + (ID) 11100
Total energy: -191200.0 ( -99.32 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2FHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FHG-query.scw
PDB file :
Tito_Scwrl_2FHG.pdb
: