Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVCHTIADVVDRAKAERSENTLRKDFT----PSELLAAGRRIAELERPKAKQRQR---EGGDHGRQARYSGLGSMEPKPESERDAHKADTAISEALGISRGHYQRLKRIDNATRSEAGYRDGLNGWSG
1Q5R Chain:A ((93-192))
--------DVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 32526 for 459 contacts (70.9/contact) +
2D Compatibility (PS) -8481 + (NN) 1748 + (LL) 1784
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: 23877.0 ( 52.02 by residue)
QMean score : 0.172
(partial model without unconserved sides chains):
PDB file :
Tito_1Q5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q5R-query.scw
PDB file :
Tito_Scwrl_1Q5R.pdb
: