Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIARLVADGPEQREVGQSAHAGRTPD
3T6N Chain:A ((12-184))
-----------PAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIARLVAD------------------
General information:
TITO was launched using:
RESULT:
Template:
3T6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104018 for 1302 contacts (-79.9/contact) +
2D Compatibility (PS) -19436 + (NN) -13163 + (LL) 536
1D Compatibility (HY) -20400 + (ID) 8650
Total energy: -165131.0 ( -126.83 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3T6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T6N-query.scw
PDB file :
Tito_Scwrl_3T6N.pdb
: