Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFR-QQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF |
1OIJ Chain:B ((13-288)) | ---------------LELDVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAKLLGEPVA-----PVV---------DGTRYLLQLDG----RANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELPEPLRELADKLWAVHSNE-----------------------VYETEHPVVRVHPISGERALQL-GHFVKRIKGYSLADSQHLFAVLQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAGEVPV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128149 for 1989 contacts (-64.4/contact) +
2D Compatibility (PS) -26027 + (NN) -15781 + (LL) 1128
1D Compatibility (HY) -10400 + (ID) 4250
Total energy: -183479.0 ( -92.25 by residue)
QMean score : 0.517
|
|
|