Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGAR-----WLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLPGQYANPRALLIRPKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLW--FSAIGVDVEVRPAVLYLSNDHALARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALECYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS |
| 3HHG Chain:A ((18-259)) | ---------------------GSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLI-PLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106166 for 1498 contacts (-70.9/contact) +
2D Compatibility (PS) -24744 + (NN) 608 + (LL) 2584
1D Compatibility (HY) -12000 + (ID) 3100
Total energy: -142818.0 ( -95.34 by residue)
QMean score : 0.368
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