Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFREL---LDPFAGVQ----SPWLERQGIVPQA---DDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQ-RYQPVVAVIAGPVGCFGGMSIA-AGLCSYVLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
| 2F9Y Chain:B ((55-235)) | ---------------MTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYK------QKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDN-----CPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPT--MGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNP---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92161 for 1328 contacts (-69.4/contact) +
2D Compatibility (PS) -18202 + (NN) -7942 + (LL) 4768
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -127237.0 ( -95.81 by residue)
QMean score : 0.409
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