Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLFAYPGQGAQRPGMLAALPD-EPPVRACLEQAADCLGQAPAELESA---EALRGTRAVQLCLLIAGVAASRLLE-TRGHRPGLVAGLSIGAYPAAVVAGALDFDDALRLVALRGELMQAAWPEGYG-MSAILGLEQAQLEALILAVRRE---HPPLYLANVNAERQLVVAGSEAA----LAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRPRVPYLSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLSGL---------ARPLFGCATPAFEGSRADTLDALLREEEKRTR |
3R97 Chain:A ((5-311)) | -TLAFVFPGQGSQSLGMLAELSELHPQIRETFAEASEGAGVDLWALSQGGPEEMLNRTEYTQPALLAAGVAVWRLWTAQRGQRPALLAGHSLGEYTALVAAGVLSLHDGAHLVRLRGQFMQAAAPAGVGAMAAVLGAE----DAVVLEVCAEAAGSQVVVPANFNSPGQIVIGGDAAAVDRALALLAER----GVRKAVKLAVSVPSHTPLMRDAANQLGEAMAGLSWHAPQIPVVQNVDARVHDGSAAIRQALVEQLYLPVQWTGCVQALASQGITRIAECGPGKVLSGLIKRIDKSLDARPL---ATPA---DYAGALDAWAH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196714 for 2562 contacts (-76.8/contact) +
2D Compatibility (PS) -31147 + (NN) -16843 + (LL) 2208
1D Compatibility (HY) -19200 + (ID) 6350
Total energy: -268046.0 ( -104.62 by residue)
QMean score : 0.599
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