Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETFTKGMARNIYFGGSVFFILLFLALTYHTEKTLPERTNEAAMSAAVVRGKLVWEQNNCVGCHTLLGEGAYFAPELGNVVGRRGGEEGFNTFLQAWMNIQPLNVPGRRAMPQFHLSEGQVDDLAEFLKWSSKIDTNQWPPNKEG
3WFC Chain:C ((5-146))
----FTKGMARNIYFGGSVFFILLFLALTYHTEKTLPERTNEAAMSAAVVRGKLVWEQNNCVGCHTLLGEGAYFAPELGNVVGRRGGEEGFNTFLQAWMKIQPLNVPGRRAMPQFHLSEGQVDDLAEFLKWSSKIDTNQWPPNKEG
General information:
TITO was launched using:
RESULT:
Template:
3WFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31301 for 873 contacts (-35.9/contact) +
2D Compatibility (PS) -15043 + (NN) -9690 + (LL) 336
1D Compatibility (HY) -20000 + (ID) 7050
Total energy: -82748.0 ( -94.79 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3WFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WFC-query.scw
PDB file :
Tito_Scwrl_3WFC.pdb
: