Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGRLRGTLAEKQPPHLILDVNGVGYEVEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKTAERLLVELKDRFKAWEN--MPTIAPLVMEPRASATVSSAEADAVSALIALGFKPQEASRAVAAVPGEDLSSEEMIRQALKGMV
1HJP Chain:A ((1-200))
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLF-----------------DAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
General information:
TITO was launched using:
RESULT:
Template:
1HJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116178 for 1319 contacts (-88.1/contact) +
2D Compatibility (PS) -20242 + (NN) -13408 + (LL) 1236
1D Compatibility (HY) -20800 + (ID) 5300
Total energy: -174692.0 ( -132.44 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_1HJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HJP-query.scw
PDB file :
Tito_Scwrl_1HJP.pdb
: