Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLELGADTVTGEQASSRVERSASA-KYAVPLLDTPQTVTVVPQKVIQEQNALSLRQVLSNVSGITFNAGEGGGGSGDSINIRGFSANANMQ---VDGLR---DSAQTSRSDLFNLEAVEVIKGPNSVFGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTLDTNQPLEGLGESTAFRLNLMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLT-LSYFHQRDDN-----LPDYGV--PALNGRKLDGVSRHDYFGWRNLDEERIDNDVATLKLEHDFSDDFQLQNLIRYSH--LHRDTV----ISASHVNQKGLPPGRYLPAGPQAY------GRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRETYDRTT-YSYN-----LGKFYPAN-GFDLHNPPGYWNGPTDKRDSARNRTELEVKALYAFDTIALDERWD---LSLGLRYDWIDGTSRSTPSGKPTVRADSSDGKLSTRAGLVFKPLENGRV-YFSYGTSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKEDARERLADGSY--VLAGEQRVRGLELSASGKLNEHWDLFATYTYLDSETLKSSNPQREGQALGNTPPRSLSLWSTYELPE----GVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQATR----DLKLQLNLDNLFDKAYVERVRQVYGNQSRSSAIEYGDGRTAILSAIYAF |
| 1BY5 Chain:A ((23-714)) | --------------------------------------------------GPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGT-RGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDG-VYSYRLTGLARSAN-AQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNE---GAKNNTYSRNEKMVG-YSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGP------YRILNKQKQTGVYVQD----QAQWDKVLVTLGGRYDWADQESLNRVAGT----TDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ--------VGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKRPLSASVNVVGSYTYTDAE--YTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYG-------CFWGAERQVVATATFRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 163309 for 5394 contacts (30.3/contact) +
2D Compatibility (PS) -66375 + (NN) -4138 + (LL) 4444
1D Compatibility (HY) -25600 + (ID) 9700
Total energy: 61940.0 ( 11.48 by residue)
QMean score : 0.139
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