Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDAAS
3CZ5 Chain:A ((7-138))
--RIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIEAILAGRRAMSPDIAQEIA--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111579 for 1092 contacts (-102.2/contact) +
2D Compatibility (PS) -14719 + (NN) -7670 + (LL) 6764
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -140954.0 ( -129.08 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_3CZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CZ5-query.scw
PDB file :
Tito_Scwrl_3CZ5.pdb
: