Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFTQEHEELRRTVRSFVEREINPNVDQWEKDGRFPIHEIFRKAGELGLLGISKPEKFGGMGLDYSYSIVAAEEFGSITCGGIPMAIGVQTDMCTPALARFGSDELREEFLRPAIAGEMVGCIGVSEVGAGSDVAGLKTTARKDGDDYVINGSKMWITNSPSADFMCLLANTSDDKPHVNKSLIVVPMKTPGITLSPHLDKLGMRSSETAQVFFDNVRVPQRNRIGAEGAGFMMQMLQFQEERLFGAANMIKGLEHCIDVTIEYCKERRTFGQPLIDNQVIHFRMAEMMTEVEALRALVYQATELYVKGRDVTRLASMAKLKAGRLGREVSDACLQYWGGMGFMWDNPVSRAYRDTRLVSIGGGADEIMLGIICKLMGILPGKKKG |
| 1JQI Chain:A ((12-379)) | ----ETHQMLRQTCRDFAEKELVPIAAQLDKEHLFPTSQV-KKMGELGLLAMDVPEELSGAGLDYLAYSIALEEI-SRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188392 for 3348 contacts (-56.3/contact) +
2D Compatibility (PS) -40247 + (NN) -22191 + (LL) 920
1D Compatibility (HY) -18000 + (ID) 6600
Total energy: -274510.0 ( -81.99 by residue)
QMean score : 0.530
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