Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDYIRDGQAIYRQSFATIRAEANLAGIPADLEKLAVRVIHACGMVDVVDDLRFSPGAGAAGRAALAAGAAILCDARMVAEGVTRSRLPAANRVICTLNEADVPALATELGNTRSAVALEHWREHLEGSVVVIGNAPTALFYLLEMLDAGAPKPALILGFPVGFVGAAESKEMLAADSRGVPYVIVRGRRGGSAMAAAAVNALATERE
1I1H Chain:A ((14-215))
--DYIRDGNAIYERSFAIIRAEADLSRFSEEEADLAVRMVHACGSVEATRQFVFSPDFVSSARAALKAGAPILCDAEMVAHGVTRARLPAGNEVICTLRDPRTPALAAEIGNTRSAAALKLWSERLAGSVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGRLGGSAMTAAALNSLA----
General information:
TITO was launched using:
RESULT:
Template:
1I1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181040 for 1800 contacts (-100.6/contact) +
2D Compatibility (PS) -22805 + (NN) -13944 + (LL) 772
1D Compatibility (HY) -18800 + (ID) 6750
Total energy: -242567.0 ( -134.76 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_1I1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I1H-query.scw
PDB file :
Tito_Scwrl_1I1H.pdb
: