Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKHNFTLVCRDLSELGVYAK-VDTGLFRLLKAHTPGPYTFILSATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQVDLIVDGGYG-GGEASTVISLTDTDPEVIRVGCGDPAPFMQPA
3AJE Chain:A ((2-220))
-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKE-VTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSP-TKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEPPVLLR-----PGPF----
General information:
TITO was launched using:
RESULT:
Template:
3AJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149029 for 1771 contacts (-84.1/contact) +
2D Compatibility (PS) -22066 + (NN) -18548 + (LL) 720
1D Compatibility (HY) -10800 + (ID) 2950
Total energy: -202673.0 ( -114.44 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_3AJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJE-query.scw
PDB file :
Tito_Scwrl_3AJE.pdb
: