Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPHLIYYVATSLDGFIARPDGSVDWLDRFAEGG-NDHGYNGFYQGIDGLLMGRGTYDIVRGF---GDWPYPGKPCQVLTRNPRESAVEGVELRHDTPQEGLARLGEQGCRRVWLAGGGSLAGSCLAAGLLDEVIVSVIPQLLGAGIPLFAGGRERRLQLLEQHGYNSGIVQMRYQVIAEDDPQ
3JTW Chain:A ((5-150))
---KVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIVTSHLGEDT-DKIKYWKQSPVELVKRIQKEKGKDVWIVGGAKIIDPLVQANLIDTYILTTVPIFLGSGIRLF----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96551 for 1004 contacts (-96.2/contact) +
2D Compatibility (PS) -15331 + (NN) -4741 + (LL) 2592
1D Compatibility (HY) -15600 + (ID) 2200
Total energy: -131831.0 ( -131.31 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_3JTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JTW-query.scw
PDB file :
Tito_Scwrl_3JTW.pdb
: