Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVE--NRAGQGLLLPSGRQLDFDRERL---GAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
| 1Q1W Chain:A ((79-123)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -481 for 141 contacts (-3.4/contact) +
2D Compatibility (PS) -4284 + (NN) -3817 + (LL) 19168
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: 6236.0 ( 44.23 by residue)
QMean score : 0.414
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