Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAET--DGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
1G76 Chain:A ((28-218))
-------------------------PADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
General information:
TITO was launched using:
RESULT:
Template:
1G76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61182 for 1333 contacts (-45.9/contact) +
2D Compatibility (PS) -20766 + (NN) -11089 + (LL) 1220
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -107717.0 ( -80.81 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1G76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G76-query.scw
PDB file :
Tito_Scwrl_1G76.pdb
: