Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLETPKKFRSLANQAHQVAENYFRPISRKYDKAEHAYPK-------ELDLLAALLDGMNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLAMPRQGLGNAAIAAVANEEQLQRFGGTWAAMAITEPGCGSDSAAIRTTATQDGDHYVLNGEKIFVTSGERADAVVVWATLNRNLGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSKEASIAKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRLLGKSSSQLK |
1JQI Chain:A ((8-383)) | --VELPETHQMLRQTCRDFAEKELVPIAAQLDK-EHLFPTSQVKKMGELGLLAMDVPEELSGAGLDYLAYSI---ALEEISRGCASTGVIMSVNNSLYL-----GPILKFGSSQQKQQWITPFTNGDKIGCF-------ALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGM----GFKIAMQTLDMGRIGIASQALGIAQASLDCA---VKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80425 for 3293 contacts (-24.4/contact) +
2D Compatibility (PS) -39402 + (NN) -15980 + (LL) 1944
1D Compatibility (HY) -21600 + (ID) 6700
Total energy: -162163.0 ( -49.24 by residue)
QMean score : 0.406
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