Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
1FX9 Chain:A ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC--
General information:
TITO was launched using:
RESULT:
Template:
1FX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75929 for 935 contacts (-81.2/contact) +
2D Compatibility (PS) -13020 + (NN) -6905 + (LL) 2308
1D Compatibility (HY) -17200 + (ID) 5050
Total energy: -115796.0 ( -123.85 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1FX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FX9-query.scw
PDB file :
Tito_Scwrl_1FX9.pdb
: