Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAE
2YIR Chain:A ((2-301))SVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK--------------LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP----------------------


General information:
TITO was launched using:
RESULT:

Template: 2YIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182272 for 2105 contacts (-86.6/contact) +
2D Compatibility (PS) -30884 + (NN) -18182 + (LL) 2056
1D Compatibility (HY) -45200 + (ID) 14300
Total energy: -288782.0 ( -137.19 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_2YIR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YIR-query.scw
PDB file : Tito_Scwrl_2YIR.pdb: