Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
1Q21 Chain:A ((1-171))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKL------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104491 for 1364 contacts (-76.6/contact) +
2D Compatibility (PS) -19115 + (NN) -9240 + (LL) -92
1D Compatibility (HY) -24000 + (ID) 8550
Total energy: -165488.0 ( -121.33 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_1Q21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q21-query.scw
PDB file :
Tito_Scwrl_1Q21.pdb
: