Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRPLNCIVAVSQNMGIGKNGDLPWPLLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPQGAHFLAKSLDDALKLIEQPELASKVDMVWVVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVLSEIQEEKGIKYKFEVYEKKD
3D84 Chain:X ((1-186))
-VRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
General information:
TITO was launched using:
RESULT:
Template:
3D84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119893 for 1401 contacts (-85.6/contact) +
2D Compatibility (PS) -19948 + (NN) -8075 + (LL) 208
1D Compatibility (HY) -26800 + (ID) 9000
Total energy: -183508.0 ( -130.98 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_3D84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D84-query.scw
PDB file :
Tito_Scwrl_3D84.pdb
: