Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
3G1D Chain:A ((8-225))
-------VMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDL---
General information:
TITO was launched using:
RESULT:
Template:
3G1D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181651 for 1918 contacts (-94.7/contact) +
2D Compatibility (PS) -23483 + (NN) -6231 + (LL) 552
1D Compatibility (HY) -31600 + (ID) 10850
Total energy: -253263.0 ( -132.05 by residue)
QMean score : 0.825
(partial model without unconserved sides chains):
PDB file :
Tito_3G1D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1D-query.scw
PDB file :
Tito_Scwrl_3G1D.pdb
: