Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLSPGQGNNTTSPPAPFETGGNTTGISDVTVSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNK-WTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAAL-ISLTWLIGFLISIP-PMLGWRTPEDRSDPDACTISKDH--GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTRHGASPAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHR--------VGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKM-ALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPTL--LGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRQ |
| 4IB4 Chain:A ((33-415)) | ---------------------------------------ALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQ-ANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET---NPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFL-----------TIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK----------------KDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCD-SCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210234 for 2502 contacts (-84.0/contact) +
2D Compatibility (PS) -35251 + (NN) -159 + (LL) 3564
1D Compatibility (HY) -40400 + (ID) 6100
Total energy: -288580.0 ( -115.34 by residue)
QMean score : 0.255
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