Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLGLSGNLLLLMVLLRYVPRRRMV---EIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDMVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQ-VFGNCEVSQHLDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMTGMNDLGERQSENYPNKEDVGNKSA |
| 4XT1 Chain:A ((48-315)) | ----------------------------------------------------YGVVFLFGSIGNFLVIFTI---TWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIV----YMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDN-----QCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255638 for 1885 contacts (-135.6/contact) +
2D Compatibility (PS) -27033 + (NN) -13486 + (LL) 7180
1D Compatibility (HY) -39600 + (ID) 4300
Total energy: -332877.0 ( -176.59 by residue)
QMean score : 0.323
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