Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHIINSYENINNTARNNSDCPRVVLPEEIFFTISIVGVLENLIVLLAVFKNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDSLFVLSLLGS-IFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLTVIWTFC--------------------------TGTGITMVIFSHHVP-TVITFTSLFPLMLV---FILCLYVHMFLLARSHTRKISTLP-----RANMKGAITLTILLGVFIFCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSPELRDAFKKMIFCSRYW |
4UG2 Chain:A ((15-303)) | --------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI---------STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL-------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAI--VLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254146 for 1846 contacts (-137.7/contact) +
2D Compatibility (PS) -24618 + (NN) -10758 + (LL) 2864
1D Compatibility (HY) -31200 + (ID) 4050
Total energy: -321908.0 ( -174.38 by residue)
QMean score : 0.304
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