Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEGGDFDNYYGADNQSECEYTD-WKSSGALIPAIYMLVFLLGTTGNGLVLWTVFRSSREKRRSADIFIASLAVADLTFVVTLPLWATYTYRDYDWPFGTFFCKLSSYLIFVNMYASVFCLTGLSFDRYLAIV----RPVANARLRLRVSGAVATAVLWVLAALLAMPVMVLRTTGDLENTTKVQCYMDYSMVATVSSEWAWEVGLGVSSTTVGFVVPFTIMLTCYFFIAQTIAGHFRKERIEGLRKRRRLLSIIVVLVVTFALCWMPYHL---VKTLYMLGSLLHW---PCDFDLFLMNIFPYCTCISYVNSCLNPFLYAFFDPRFRQACTSMLCCGQSRCAGTSHSSSGEKSASYSSGHSQGPGPNMGKGGEQMHEKSIPYSQETLVVD |
| 4XT1 Chain:A ((26-318)) | -------------EDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTI-TWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLL-D------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQA--------CLFSIFWWIFAVIIAIPHFMVVTKKD------NQCMTDYDYL-----EVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVA-------VSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTL----KLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255630 for 1998 contacts (-127.9/contact) +
2D Compatibility (PS) -27674 + (NN) -1274 + (LL) 3096
1D Compatibility (HY) -40400 + (ID) 4850
Total energy: -326732.0 ( -163.53 by residue)
QMean score : 0.234
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