Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDE-AEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWA------HAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQ----MEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLRFREQRYS--LFKLVFAIMVVFLLMWAPYNIAFFLSTFK-EHFSLSDCKSSYNLDKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 4XT3 Chain:A ((26-310)) | -----------------------EDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRY-----RPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYL------------EVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215851 for 1973 contacts (-109.4/contact) +
2D Compatibility (PS) -26952 + (NN) -7828 + (LL) 3504
1D Compatibility (HY) -37600 + (ID) 3550
Total energy: -288277.0 ( -146.11 by residue)
QMean score : 0.335
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