Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPLNLSWYDDDLERQNWSRPFNGSDGKADRPHYNYYATLLTLLIAV-IVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGE--WKFSRIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISCPL-LFGL--NNADQNECIIANP---AFVVYSSIVSFYVPFIVTLLVYIKIYIVLRRRRKRVNTKRSSRAFRAHLRAPLKGNC-THPEDMKLCTVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHHG---LHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTSLKTMSRRKLSQQKEKKATQMLAIVLGVFIICWLPFFITHILNIHCD-CN--IPPVLYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFLKILHC |
| 4IB4 Chain:A ((23-413)) | ----------------------------EEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMP-IALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQAN-QYNSRATAFIKITVVWLISIGIAIPVPIKGIET-NPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTY---FLTIHALQKKA--------------ADLEDNWETLNDNLK---VIEKADNAAQV--KDALTKMRAAALDAQ---K----------------KDF------RHGFDILVGQIDDALKLANEGKVKEAQAAAE--QLKTTRNAYIQKYLQTISN-------EQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227464 for 2577 contacts (-88.3/contact) +
2D Compatibility (PS) -35600 + (NN) 6394 + (LL) 3472
1D Compatibility (HY) -40400 + (ID) 6500
Total energy: -300098.0 ( -116.45 by residue)
QMean score : 0.252
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