Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHPRASNQTFCWEQWPDPR--HKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNM-SKKSEASKKKTAQTVLVVVVVFGISWLPHHI-IHLWAEFGV---FPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 4RWA Chain:A ((128-406)) | --------------------------------------LYSAVCAVGLLGNVLVMFGIVRYT--KMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL---------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIA---LGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232400 for 1991 contacts (-116.7/contact) +
2D Compatibility (PS) -26657 + (NN) -5248 + (LL) 3428
1D Compatibility (HY) -30800 + (ID) 4800
Total energy: -296477.0 ( -148.91 by residue)
QMean score : 0.277
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