Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVSGCPGAGNASQAGGGGGWHPEAVIVPLLFALIFLVGTVGNTLVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDGWVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLSLLFSGPYLSYYRQSQLANLTVCHPAWSAPR---RRAMDICTFVFSYLLPVLVLGLTYARTLRYLWRAVDPVAAGSGAR-RAKRKVTRMILIVAALFCLCWMPHHALILCVWF-----GQFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKGFRTICAGLLGRAPGRASGRVCAAARGTHSGSVLERESSDLLHMSEAAGALRPCPGASQPCILEPCPGPSWQGPKAGDSILTVDVA |
| 4N6H Chain:A ((112-409)) | ----GSPGARSASSLA-------LAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVR--LLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVI-VWTLVDIDRRDPLVVAALHLCI---ALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267541 for 2221 contacts (-120.5/contact) +
2D Compatibility (PS) -29999 + (NN) -10610 + (LL) 2288
1D Compatibility (HY) -27600 + (ID) 4950
Total energy: -338412.0 ( -152.37 by residue)
QMean score : 0.361
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