Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGLFLSCLYTIFLFPIGFVGNILILVVNISFREKMTIP-DLYFINLAVADLILVADSLIEVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCGLIWMASVSATLVPFTAVHLQHTDEACFCFADVREVQW-----LEVTLG-FIVPFAIIGLCYSLIVRVL-VRAHRHRGLRPRRQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPC--KQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV |
| 4XT3 Chain:A ((51-310)) | ------------------------------------------------------------------VFLF--GSIGNFLV-IFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MR---YRPVKQACLFSIFWWIFAVIIAIPHFMVV--TKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKG------RIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESL----AFCHCCLNPLLYVFVGTKFRQELHCLLAE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212040 for 1783 contacts (-118.9/contact) +
2D Compatibility (PS) -24568 + (NN) -4398 + (LL) 7804
1D Compatibility (HY) -36800 + (ID) 4550
Total energy: -274552.0 ( -153.98 by residue)
QMean score : 0.268
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