Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQ-----------CTF-QHRSFRANDSLGFMLLLALILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTLLGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGFLTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI |
| 2Y00 Chain:A ((18-300)) | --------------------------MALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG-TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLI-----MIFVALRVYREAKEQ----------------------------------------------------SR--VMLMREHKALKTLG----IIMGVFTLCWLPFFLVNIVNVFNRD-LVPDWLFVAFNWLGYANSAMNPIIYCRSP-DFRKAFKRLLA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281708 for 1935 contacts (-145.6/contact) +
2D Compatibility (PS) -26122 + (NN) -7705 + (LL) 6384
1D Compatibility (HY) -28800 + (ID) 3400
Total energy: -341351.0 ( -176.41 by residue)
QMean score : 0.324
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