Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGSCCRIEGDTISQVMPPLLIVAFVLGALGNGVALCGFCFHMKTWKPSTVYLFNLAVADFLLMICLPFR-TDYYLRRRHWAFGDIPCRVGLFTLAMNRAGSIVFLTVVAADRYFKVVHPHHAVNTISTRVAAGIVCTLWALVILGTVYLLLENHLCVQETAVSCESFIMESANGWHDI----MFQLEFFMPLGIILFCSFKIVWSLRRRQQLA----RQARMKKATRFIMVVAIVFITCYLP-SVSARLYFLWTVPSSACDPSVHGALHITLSFTYMNSMLDPLVYYFSSPSFPKFYNKLKICSLKPKQPGHSKTQRPEEMPISNLGRRSCISVANSFQSQSDGQWDPHIVEWH |
4EA3 Chain:A ((137-405)) | --------------------------VGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLG--FWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAI---LRFCTALGYVNSCLNPILYAFLDENFKACFR-------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -205011 for 1859 contacts (-110.3/contact) +
2D Compatibility (PS) -25156 + (NN) -231 + (LL) 5200
1D Compatibility (HY) -22400 + (ID) 3650
Total energy: -251248.0 ( -135.15 by residue)
QMean score : 0.171
|
|
|