Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIVKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFLMDNYVRRWDWKFGDIPCRLMLFMLAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNRTAAIISCLLWGIT--IGLTVHLLKKKMPIQNGGANLCSSFSICH-TFQWHE----AMFLLEFFLPLGIILFCSARIIWSLRQRQM-----DRHAKIKRAITFIMVVAIVFVICFLPSVVVRIRIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKMTGEPDNNRSTSVELTGDPNKTRGAPEALMANSGEPWSPSYLGPTSP |
| 5C1M Chain:A ((29-296)) | --------------------------------------VVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMG-TWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATT-KYRQGSIDCTLTFS--HPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTP-----IHIYVIIKALITIPETTFQTVSWHFCIALGYT--NSCLNPVLYAFLDENFKRCF---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216576 for 1857 contacts (-116.6/contact) +
2D Compatibility (PS) -26595 + (NN) -12140 + (LL) 5628
1D Compatibility (HY) -33600 + (ID) 4200
Total energy: -287483.0 ( -154.81 by residue)
QMean score : 0.304
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