Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPWNGSDGPEGAREPPWPALPPCDERRCSPFPLGALVPVTAVCLCLFVVGVSGNVVTVMLIGRYRDMRT---TTNLYLGSMAVSDLLILLG-LPFDLYR-LWRSRPWVFGPLLCRLSLYVGEGCTYATLLHMTALSVERYLAICRPLRARVLVTRRRVRALIAVLWAVALLSAGPFLFLVGVEQDPGISVVPGLNGTARIASSPLASSPPLWLSRAPPPSPPSGPETAEAAALFSRECRPSPAQLGALRVMLWVTTAYFFL-PFLCLSILYGLIGREL----WSSRRPLRGPAASGRERGHRQTVRVLLVVVLAFIICWLPFHVGRIIYINTEDSR----MMYFSQYFNIVALQLFYLSASINPILYNLISKKYRAAAFKLLLARKSRPRGFHRSRDTAGEVAGDTGGDTVGYTETSANVKTMG |
| 3ZEV Chain:A ((20-316)) | --------------------------------------VLVTAIYLALFVVGTVGNSVTLFTLARKK---SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNLSGDGTHPG-----GLVCTPIVDT-------------------------------------ATLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ----------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVFLSTLAC---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240218 for 1970 contacts (-121.9/contact) +
2D Compatibility (PS) -27527 + (NN) -12415 + (LL) 3284
1D Compatibility (HY) -33600 + (ID) 5900
Total energy: -316376.0 ( -160.60 by residue)
QMean score : 0.346
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