Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGENHTTLPEFLLLGFSDLKALQGPLFWVVLLVYLVTLLGNSLIILLTQVSPALHSPMYFFLRQLSVVEL--------FYTTDIVPR--TLANLGSPHPQAISFQGCAAQMYVFIVLGISECCLLTAMAYDRYVAICQPLRYSTLLSPRACMAMVGTSWLTGIITATTHASLIFSLPFRSHPIIPHFLCDILPVLRLASAGKHRSE--ISVMTATIVFIMIPFSLIVTSYIRILGAILAMASTQS-------RRKVFSTCS-------SHLLVVSLFFGTAS---ITYIRPQAGSSVTTDRVLSLFYTVITPMLNPIIYTLRNKDVRRALRHLVKRQRPSP |
4U14 Chain:A ((24-290)) | -----------------------------------LVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVI-----------SFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWA--PAILFWQYFVGKRTVPPGECFI----------QFLSEPTITFGTAIAAFYM-PVTIMTILYWRIYKETEKMNCFEMLRIDEGLRLKIYKDCEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLF----------------NQDVDAAVRGILRNAKLKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115601 for 1440 contacts (-80.3/contact) +
2D Compatibility (PS) -23952 + (NN) -1163 + (LL) 6348
1D Compatibility (HY) -18800 + (ID) 3400
Total energy: -156568.0 ( -108.73 by residue)
QMean score : 0.139
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