Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHT-PMYFLLSQLSLMDLMHVSTIILKMATNYL-SGKKSISFVGCATQHFLYLCLGGAECFLLAVMSYDRYVAICHPLRY-AVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCEFPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMRSSGSKRNAFATCGSHLTVVSLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTLNSLIYTLRNKDVAKALRRVLRRDVITQCIQRLQLWLPRV |
4U15 Chain:A ((13-160)) | ------------------------VFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLS-LACADLI-IGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIG-LAWVISFV--LWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKMNIFEMLRIDEGGGSGGDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117305 for 921 contacts (-127.4/contact) +
2D Compatibility (PS) -14707 + (NN) -6867 + (LL) 1948
1D Compatibility (HY) -16400 + (ID) 2400
Total energy: -155731.0 ( -169.09 by residue)
QMean score : 0.205
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