Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLANQTLGGDFFLLGIFSQISHPGRLCLLIFSIFLMAVSWNITLILLIHIDSSLHTPMYFFINQLSLIDLTYISVTVPKMLVNQLAKDKTISVLGCGTQMYFYLQLGG--------AECCLLAAMAYDRYVAICHPLRYSVLMSHRVCLLLASGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFC-EVPAVLKLSCSDTSLYKIFMYLCCVIMLLIPVTV-ISVS---YYYIILTIHKMNSVEGRKKAFTTCSSHITVVSLFYGAAIYN-----YMLPSSYQTPEKDMMSSFFYTIL------TPVLNPIIYSFRNKDVTRALKKMLSVQKPPY |
| 2YCX Chain:A ((9-294)) | --------------------QWEAG-MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--------GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMH--WWRDEDPQALKCYQDPG-----CCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLM-REHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178476 for 1771 contacts (-100.8/contact) +
2D Compatibility (PS) -25930 + (NN) -1663 + (LL) 4044
1D Compatibility (HY) -18400 + (ID) 3450
Total energy: -223875.0 ( -126.41 by residue)
QMean score : 0.105
|
|
|