Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENRNNMTEFVLLGLTENPKMQKIIFVVFFVIYIITVVGYVLIVVTITASPSLGSPMYLSLAYLSFIDACYSSVNTPNLITHSLYGKKAIL-FNGCMTQVFGEHFFGGAEGIL----LTVMAYDHYVAICKPLHYMTIMNQCVCALLMGVVWMGGFLHATIQILFIFQLPFCGPNVIDHFMCD--LNPLLNLACTDTHMLELFIAANSG-----FICLLNFALLLVSYVVILCSL--RTHSLEARH-KALSTCVSHITVVILFFVPCIFVYMRPAATL-------------PIDKAVAIFYTMITPMLNPLIYTLKNAQMKNAIRKLCSRKDISGDK
3AYM Chain:A ((60-328))-----------------------------------------------TKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAAC--KVYG--FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF------GWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF


General information:
TITO was launched using:
RESULT:

Template: 3AYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183025 for 1697 contacts (-107.9/contact) +
2D Compatibility (PS) -24332 + (NN) -7226 + (LL) 6292
1D Compatibility (HY) -19200 + (ID) 2900
Total energy: -230391.0 ( -135.76 by residue)
QMean score : 0.243

(partial model without unconserved sides chains):
PDB file : Tito_3AYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AYM-query.scw
PDB file : Tito_Scwrl_3AYM.pdb: