Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQNQDTMEILSNSTSKFPTFLLTGIPGLESAHVWISIPFCCFYAIALSGNSVILFVIITQQSLHEPMYYFLFRLSATDLGLTVSSLSTTLGILWFEAREISLYSCIVQMFFLHGFTFMESGVLVATAFDRYVAICDPLRYTTILTNSRIIQMGLLMITRAIVLILPLLLLLKPLYFCRMNALSHSYCYHPDVIQLACSDIRANSICGLIDLILTTGIDTPCIVLSYILIIHSVLRIASPEEWHKVFSTCVSHVGAVAFFYIHMLSLSLVYRYGRSAPRVVHSVMANVYLLLPPVLNPIIDSVKTKQIRKAMLSLLLTK
3VGA Chain:A ((19-120))---------------------------------------------LAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGV--LAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQ


General information:
TITO was launched using:
RESULT:

Template: 3VGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62353 for 603 contacts (-103.4/contact) +
2D Compatibility (PS) -10019 + (NN) 1128 + (LL) 3048
1D Compatibility (HY) -10800 + (ID) 1450
Total energy: -80446.0 ( -133.41 by residue)
QMean score : 0.027

(partial model without unconserved sides chains):
PDB file : Tito_3VGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGA-query.scw
PDB file : Tito_Scwrl_3VGA.pdb: