Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERINHTSSVSEFILLGLSSRPEDQKTLFVLFLIVYLVTITGNLLIILAIRFNPHLQTPMYFFLSFLSLTDICFTTSVVPKMLMNFLSEKKTISYAGCLTQMYFLYALGNSDSCL--------LAVMAFDRYVAVCDPFHYVTTMSHHHCVLLVAFSCSFPHLHSLLHTLLLNRLTFCDSNVIHHFLCDLSP-VLKL----SCSSIFVNEIVQMTEAPIVLVTRFLCIAFSYIRIL----TTVLKIPSTSGKR--------KAFSTCGFYLTVVTLFYGSIFCVYLQPPSTYAVKDHVATIVYTVL------SSMLNPFIYSLRNKDLKQGLRKLMSKRS |
| 2YCW Chain:A ((6-298)) | -----------------LSQQWEAGMSL--LMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVII---CTVWAISALVSFL----------PIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNI---VNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183643 for 1790 contacts (-102.6/contact) +
2D Compatibility (PS) -26124 + (NN) -2715 + (LL) 3652
1D Compatibility (HY) -32800 + (ID) 3800
Total energy: -245430.0 ( -137.11 by residue)
QMean score : 0.201
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