Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVWENQTFNSIFILLGIFNHSPTHTFLFSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSYLSGKKSISLAGCGTQIFFYVSLLGAECFL--LAVMAYDRYVAICHPLQYTILMNPKLCVFMTVASWTLGSLDGIIVLAAVLSFSYCSSL-EIHHFFCDVAALLPLSCTETSAFERLLVICCVVMLIFPVSVIILSYSHVLRAVIHMGSGESRRKAFTTCSSHLSVVGL--------------YYGAAMFMYMRPASKHTPDQDKMVSAFYTILTPMLNPLIYSLRNKEVFRALQKVLKKRKLI |
3C9L Chain:A ((66-314)) | ----------------------------------------------------KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMA-----LACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESF---VIYMFVVHFIIPLIVIFFCYGQLVFTVKE--AAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQ-FRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197650 for 1705 contacts (-115.9/contact) +
2D Compatibility (PS) -23326 + (NN) -5902 + (LL) 6336
1D Compatibility (HY) -20400 + (ID) 3000
Total energy: -243942.0 ( -143.07 by residue)
QMean score : 0.245
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