Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPQNYSLVSEFVLHGLCTSRHLQNFFFIFFFGVYVAIMLG---NLLILVTVISDPCLHSSPMYFLLGNLAFLDMWLASFATPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSMAYDRYVAICKPLHYMTLMSWQTCIRLVLASWVVGFVHSISQVAFT-VNLPYCGPNEVDSFFCDLPLVIKLAC-MDTYVLGIIMISDSGLLSLSC--FLLLLI---------SYTVILLAIRQRAAGSTSKALSTCSAHIMVVTLFF--------GPCIFVYVRPFSRFS-VDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAMKKLQNRRVTFQ |
| 3C9L Chain:A ((48-317)) | -------------------------------------IMLGFPINFLTLYVTVQHKKLRT-PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP----------------MSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170378 for 1830 contacts (-93.1/contact) +
2D Compatibility (PS) -23819 + (NN) 2711 + (LL) 4928
1D Compatibility (HY) -18000 + (ID) 3200
Total energy: -207758.0 ( -113.53 by residue)
QMean score : 0.210
|
|
|